Serveur d'exploration sur les effecteurs de phytopathogènes

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

Integrity of the post-LRR domain is required for TNLs' function.

Identifieur interne : 000125 ( Main/Exploration ); précédent : 000124; suivant : 000126

Integrity of the post-LRR domain is required for TNLs' function.

Auteurs : Simon Bernard Saucet [France] ; Daniel Esmenjaud [France] ; Cyril Van Ghelder [France]

Source :

RBID : pubmed:33197377

Abstract

Plants trigger appropriate defense responses notably through intracellular nucleotide-binding (NB) and leucine-rich repeat (LRR) containing receptor genes (NLRs) that detect secreted pathogen effector proteins. In NLR resistance genes, the toll/interleukin-1 receptor (TIR)-NB-LRRs (TNLs) are an important subfamily out of which approximately half members carry a post-LRR (PL) domain of unknown role. We first investigated the requirement of the PL domain for TNL-mediated immune response by mutating the most conserved amino acids across PL domains of Arabidopsis thaliana TNLs. We identified several amino acids in the PL domain of RPS4 required for its ability to trigger a hypersensitive response to AvrRps4 in N. tabacum transient assay. Mutating the corresponding amino acids within the PL domain of the tobacco TNL gene N also affected its function. Consequently, our results indicate that the integrity of the PL domain at conserved positions is crucial for at least two unrelated TNLs. We then tested the PL domain specificity for function by swapping PL domains between the paralogs RPS4 and RPS4B. Our results suggest that the PL domain is involved in their TNL pair specificity, 'off state' stability and NLR complex activation. Considering genetically paired Arabidopsis TNLs, we finally compared the PL and TIR domains of their sensor and executor sequences, respectively. While TIR and PL domains from executors present complete motifs, sensors showed a lack of conservation with degenerated motifs. We provide here a first contribution to the functional analysis of the PL domain in order to decipher its role for TNLs' function.

DOI: 10.1094/MPMI-06-20-0156-R
PubMed: 33197377


Affiliations:


Links toward previous steps (curation, corpus...)


Le document en format XML

<record>
<TEI>
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en">Integrity of the post-LRR domain is required for TNLs' function.</title>
<author>
<name sortKey="Saucet, Simon Bernard" sort="Saucet, Simon Bernard" uniqKey="Saucet S" first="Simon Bernard" last="Saucet">Simon Bernard Saucet</name>
<affiliation wicri:level="1">
<nlm:affiliation>INRAE, Institut Sophia Agrobiotech, Sophia Antipolis, France; simon.saucet@inrae.fr.</nlm:affiliation>
<country wicri:rule="url">France</country>
<wicri:regionArea>INRAE, Institut Sophia Agrobiotech, Sophia Antipolis</wicri:regionArea>
<wicri:noRegion>Sophia Antipolis</wicri:noRegion>
<wicri:noRegion>Sophia Antipolis</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Esmenjaud, Daniel" sort="Esmenjaud, Daniel" uniqKey="Esmenjaud D" first="Daniel" last="Esmenjaud">Daniel Esmenjaud</name>
<affiliation wicri:level="1">
<nlm:affiliation>INRAE, Institut Sophia Agrobiotech, 400 route des Chappes, Sophia Antipolis, France, 06903; daniel.esmenjaud@inrae.fr.</nlm:affiliation>
<country wicri:rule="url">France</country>
<wicri:regionArea>INRAE, Institut Sophia Agrobiotech, 400 route des Chappes, Sophia Antipolis, France</wicri:regionArea>
<wicri:noRegion>France</wicri:noRegion>
<wicri:noRegion>France</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Van Ghelder, Cyril" sort="Van Ghelder, Cyril" uniqKey="Van Ghelder C" first="Cyril" last="Van Ghelder">Cyril Van Ghelder</name>
<affiliation wicri:level="1">
<nlm:affiliation>INRAE, Institut Sophia Agrobiotech, Sophia Antipolis, France; cyril.van-ghelder@inrae.fr.</nlm:affiliation>
<country wicri:rule="url">France</country>
<wicri:regionArea>INRAE, Institut Sophia Agrobiotech, Sophia Antipolis</wicri:regionArea>
<wicri:noRegion>Sophia Antipolis</wicri:noRegion>
<wicri:noRegion>Sophia Antipolis</wicri:noRegion>
</affiliation>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">PubMed</idno>
<date when="2020">2020</date>
<idno type="RBID">pubmed:33197377</idno>
<idno type="pmid">33197377</idno>
<idno type="doi">10.1094/MPMI-06-20-0156-R</idno>
<idno type="wicri:Area/Main/Corpus">000008</idno>
<idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">000008</idno>
<idno type="wicri:Area/Main/Curation">000008</idno>
<idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Curation">000008</idno>
<idno type="wicri:Area/Main/Exploration">000008</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title xml:lang="en">Integrity of the post-LRR domain is required for TNLs' function.</title>
<author>
<name sortKey="Saucet, Simon Bernard" sort="Saucet, Simon Bernard" uniqKey="Saucet S" first="Simon Bernard" last="Saucet">Simon Bernard Saucet</name>
<affiliation wicri:level="1">
<nlm:affiliation>INRAE, Institut Sophia Agrobiotech, Sophia Antipolis, France; simon.saucet@inrae.fr.</nlm:affiliation>
<country wicri:rule="url">France</country>
<wicri:regionArea>INRAE, Institut Sophia Agrobiotech, Sophia Antipolis</wicri:regionArea>
<wicri:noRegion>Sophia Antipolis</wicri:noRegion>
<wicri:noRegion>Sophia Antipolis</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Esmenjaud, Daniel" sort="Esmenjaud, Daniel" uniqKey="Esmenjaud D" first="Daniel" last="Esmenjaud">Daniel Esmenjaud</name>
<affiliation wicri:level="1">
<nlm:affiliation>INRAE, Institut Sophia Agrobiotech, 400 route des Chappes, Sophia Antipolis, France, 06903; daniel.esmenjaud@inrae.fr.</nlm:affiliation>
<country wicri:rule="url">France</country>
<wicri:regionArea>INRAE, Institut Sophia Agrobiotech, 400 route des Chappes, Sophia Antipolis, France</wicri:regionArea>
<wicri:noRegion>France</wicri:noRegion>
<wicri:noRegion>France</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Van Ghelder, Cyril" sort="Van Ghelder, Cyril" uniqKey="Van Ghelder C" first="Cyril" last="Van Ghelder">Cyril Van Ghelder</name>
<affiliation wicri:level="1">
<nlm:affiliation>INRAE, Institut Sophia Agrobiotech, Sophia Antipolis, France; cyril.van-ghelder@inrae.fr.</nlm:affiliation>
<country wicri:rule="url">France</country>
<wicri:regionArea>INRAE, Institut Sophia Agrobiotech, Sophia Antipolis</wicri:regionArea>
<wicri:noRegion>Sophia Antipolis</wicri:noRegion>
<wicri:noRegion>Sophia Antipolis</wicri:noRegion>
</affiliation>
</author>
</analytic>
<series>
<title level="j">Molecular plant-microbe interactions : MPMI</title>
<idno type="ISSN">0894-0282</idno>
<imprint>
<date when="2020" type="published">2020</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc>
<textClass></textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">Plants trigger appropriate defense responses notably through intracellular nucleotide-binding (NB) and leucine-rich repeat (LRR) containing receptor genes (NLRs) that detect secreted pathogen effector proteins. In NLR resistance genes, the toll/interleukin-1 receptor (TIR)-NB-LRRs (TNLs) are an important subfamily out of which approximately half members carry a post-LRR (PL) domain of unknown role. We first investigated the requirement of the PL domain for TNL-mediated immune response by mutating the most conserved amino acids across PL domains of Arabidopsis thaliana TNLs. We identified several amino acids in the PL domain of RPS4 required for its ability to trigger a hypersensitive response to AvrRps4 in N. tabacum transient assay. Mutating the corresponding amino acids within the PL domain of the tobacco TNL gene N also affected its function. Consequently, our results indicate that the integrity of the PL domain at conserved positions is crucial for at least two unrelated TNLs. We then tested the PL domain specificity for function by swapping PL domains between the paralogs RPS4 and RPS4B. Our results suggest that the PL domain is involved in their TNL pair specificity, 'off state' stability and NLR complex activation. Considering genetically paired Arabidopsis TNLs, we finally compared the PL and TIR domains of their sensor and executor sequences, respectively. While TIR and PL domains from executors present complete motifs, sensors showed a lack of conservation with degenerated motifs. We provide here a first contribution to the functional analysis of the PL domain in order to decipher its role for TNLs' function.</div>
</front>
</TEI>
<pubmed>
<MedlineCitation Status="Publisher" Owner="NLM">
<PMID Version="1">33197377</PMID>
<DateRevised>
<Year>2020</Year>
<Month>11</Month>
<Day>16</Day>
</DateRevised>
<Article PubModel="Print-Electronic">
<Journal>
<ISSN IssnType="Print">0894-0282</ISSN>
<JournalIssue CitedMedium="Print">
<PubDate>
<Year>2020</Year>
<Month>Nov</Month>
<Day>16</Day>
</PubDate>
</JournalIssue>
<Title>Molecular plant-microbe interactions : MPMI</Title>
<ISOAbbreviation>Mol Plant Microbe Interact</ISOAbbreviation>
</Journal>
<ArticleTitle>Integrity of the post-LRR domain is required for TNLs' function.</ArticleTitle>
<ELocationID EIdType="doi" ValidYN="Y">10.1094/MPMI-06-20-0156-R</ELocationID>
<Abstract>
<AbstractText>Plants trigger appropriate defense responses notably through intracellular nucleotide-binding (NB) and leucine-rich repeat (LRR) containing receptor genes (NLRs) that detect secreted pathogen effector proteins. In NLR resistance genes, the toll/interleukin-1 receptor (TIR)-NB-LRRs (TNLs) are an important subfamily out of which approximately half members carry a post-LRR (PL) domain of unknown role. We first investigated the requirement of the PL domain for TNL-mediated immune response by mutating the most conserved amino acids across PL domains of Arabidopsis thaliana TNLs. We identified several amino acids in the PL domain of RPS4 required for its ability to trigger a hypersensitive response to AvrRps4 in N. tabacum transient assay. Mutating the corresponding amino acids within the PL domain of the tobacco TNL gene N also affected its function. Consequently, our results indicate that the integrity of the PL domain at conserved positions is crucial for at least two unrelated TNLs. We then tested the PL domain specificity for function by swapping PL domains between the paralogs RPS4 and RPS4B. Our results suggest that the PL domain is involved in their TNL pair specificity, 'off state' stability and NLR complex activation. Considering genetically paired Arabidopsis TNLs, we finally compared the PL and TIR domains of their sensor and executor sequences, respectively. While TIR and PL domains from executors present complete motifs, sensors showed a lack of conservation with degenerated motifs. We provide here a first contribution to the functional analysis of the PL domain in order to decipher its role for TNLs' function.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y">
<Author ValidYN="Y">
<LastName>Saucet</LastName>
<ForeName>Simon Bernard</ForeName>
<Initials>SB</Initials>
<AffiliationInfo>
<Affiliation>INRAE, Institut Sophia Agrobiotech, Sophia Antipolis, France; simon.saucet@inrae.fr.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Esmenjaud</LastName>
<ForeName>Daniel</ForeName>
<Initials>D</Initials>
<AffiliationInfo>
<Affiliation>INRAE, Institut Sophia Agrobiotech, 400 route des Chappes, Sophia Antipolis, France, 06903; daniel.esmenjaud@inrae.fr.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Van Ghelder</LastName>
<ForeName>Cyril</ForeName>
<Initials>C</Initials>
<AffiliationInfo>
<Affiliation>INRAE, Institut Sophia Agrobiotech, Sophia Antipolis, France; cyril.van-ghelder@inrae.fr.</Affiliation>
</AffiliationInfo>
</Author>
</AuthorList>
<Language>eng</Language>
<PublicationTypeList>
<PublicationType UI="D016428">Journal Article</PublicationType>
</PublicationTypeList>
<ArticleDate DateType="Electronic">
<Year>2020</Year>
<Month>11</Month>
<Day>16</Day>
</ArticleDate>
</Article>
<MedlineJournalInfo>
<Country>United States</Country>
<MedlineTA>Mol Plant Microbe Interact</MedlineTA>
<NlmUniqueID>9107902</NlmUniqueID>
<ISSNLinking>0894-0282</ISSNLinking>
</MedlineJournalInfo>
<CitationSubset>IM</CitationSubset>
</MedlineCitation>
<PubmedData>
<History>
<PubMedPubDate PubStatus="entrez">
<Year>2020</Year>
<Month>11</Month>
<Day>16</Day>
<Hour>20</Hour>
<Minute>8</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="pubmed">
<Year>2020</Year>
<Month>11</Month>
<Day>17</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="medline">
<Year>2020</Year>
<Month>11</Month>
<Day>17</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
</History>
<PublicationStatus>aheadofprint</PublicationStatus>
<ArticleIdList>
<ArticleId IdType="pubmed">33197377</ArticleId>
<ArticleId IdType="doi">10.1094/MPMI-06-20-0156-R</ArticleId>
</ArticleIdList>
</PubmedData>
</pubmed>
<affiliations>
<list>
<country>
<li>France</li>
</country>
</list>
<tree>
<country name="France">
<noRegion>
<name sortKey="Saucet, Simon Bernard" sort="Saucet, Simon Bernard" uniqKey="Saucet S" first="Simon Bernard" last="Saucet">Simon Bernard Saucet</name>
</noRegion>
<name sortKey="Esmenjaud, Daniel" sort="Esmenjaud, Daniel" uniqKey="Esmenjaud D" first="Daniel" last="Esmenjaud">Daniel Esmenjaud</name>
<name sortKey="Van Ghelder, Cyril" sort="Van Ghelder, Cyril" uniqKey="Van Ghelder C" first="Cyril" last="Van Ghelder">Cyril Van Ghelder</name>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Bois/explor/PlantPathoEffV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000125 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 000125 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Bois
   |area=    PlantPathoEffV1
   |flux=    Main
   |étape=   Exploration
   |type=    RBID
   |clé=     pubmed:33197377
   |texte=   Integrity of the post-LRR domain is required for TNLs' function.
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i   -Sk "pubmed:33197377" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd   \
       | NlmPubMed2Wicri -a PlantPathoEffV1 

Wicri

This area was generated with Dilib version V0.6.38.
Data generation: Sat Nov 21 16:00:34 2020. Site generation: Sat Nov 21 16:01:01 2020